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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9421575 chr10:88829128 C/T FAM35B chr10:46897641-46939143:+ -0.58 -8.04 7.25E-15 Box Plot
THCA rs9421579 chr10:88832746 A/G FAM35B chr10:46897641-46939143:+ 0.55 7.91 1.82E-14 Box Plot
THCA rs9421581 chr10:88851699 A/C FAM35B chr10:46897641-46939143:+ -0.61 -9.98 1.97E-21 Box Plot
THCA rs9421582 chr10:88860826 A/C FAM35B chr10:46897641-46939143:+ -0.65 -10.79 1.94E-24 Box Plot
THCA rs9421583 chr10:88866716 A/G FAM35B chr10:46897641-46939143:+ -0.37 -7.2 2.29E-12 Box Plot
THCA rs9421589 chr10:88879803 C/T FAM35B chr10:46897641-46939143:+ -0.37 -7.25 1.67E-12 Box Plot
THCA rs9461259 chr6:26504835 C/A ZNF322B chr9:99957633-99961910:- 0.55 10.32 1.08E-22 Box Plot
THCA rs9461267 chr6:26525455 T/G ZNF322B chr9:99957633-99961910:- 0.54 10.3 1.35E-22 Box Plot
THCA rs9461270 chr6:26544110 A/G ZNF322B chr9:99957633-99961910:- 0.54 10.32 1.16E-22 Box Plot
THCA rs9461271 chr6:26554968 G/A ZNF322B chr9:99957633-99961910:- 0.57 11.17 6.6E-26 Box Plot
THCA rs9461273 chr6:26584526 A/G ZNF322B chr9:99957633-99961910:- -0.65 -13.14 6.78E-34 Box Plot
THCA rs9461275 chr6:26590801 C/T ZNF322B chr9:99957633-99961910:- 0.71 14.96 8.6E-42 Box Plot
THCA rs9461276 chr6:26595168 T/C ZNF322B chr9:99957633-99961910:- 0.72 15.24 4.93E-43 Box Plot
THCA rs9461288 chr6:26671135 T/C ZNF322B chr9:99957633-99961910:- 0.73 14.94 1.14E-41 Box Plot
THCA rs9461302 chr6:26761163 G/C ZNF322B chr9:99957633-99961910:- -0.56 -9.25 7.27E-19 Box Plot